Linux CUDA 'Special' App finally available, featuring Low CPU use

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Message 1855007 - Posted: 12 Mar 2017, 9:45:59 UTC - in response to Message 1855002.  
Last modified: 12 Mar 2017, 9:46:18 UTC

You won't need to run that command every time you edit a file, but it is worth doing it after you copy files from some other place to the BOINC working directory as sometimes the permissions don't get the directory permissions, but carry their "old" permissions along for the ride. I've noticed this most when using a USB stick to do the transfer....


. . I need to start a notebook and write down all these commands and syntaxes and stuff because I have a goldfish memory. But I think this time I really, really stuffed up.

. . IT'S WORKING!!

. . But of course Murphy is still looking over my shoulder, he is never far away, each work request is now being greeted by stoney silence :(

Stephen

Sound the trumpets, beat the drums, something wicked this way comes ...



Run times seem OK. An ar .44 task that used to take 700 seconds goes now in 300 seconds.
Did you test offline with vlar work from Arecibo and GBT?
To overcome Heisenbergs:
"You can't always get what you want / but if you try sometimes you just might find / you get what you need." -- Rolling Stones
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Message 1855019 - Posted: 12 Mar 2017, 10:41:49 UTC - in response to Message 1854952.  

. . Hey there TBar,

. . I have to grovel a little. Your 1050 is only a mere few seconds behind my 1050ti. 305 for me and maybe 3010 for you, though it is early days yet that is a difference not work mentioning. I cannot do a screen grab of the nividia-smi -l display but:

Fan at 65%
Temp at 61degC
Power at 60/75
But
GPU use at only 90%

I think the memory management can keep up with the 1050 in full crunch but not quite with the 1050ti. So for Seti crunching with Your special app the 1050 is the better choice. Cheaper to buy and cheaper to run. Of course I am running an MSI low profile version with standard clocks, on an OC version like a Strix with an external PCI-e connector there might be a little bit more difference in results. But bang for your buck seems to go to the 1050. Though best bang for your Watts still seems to be the 750ti.

Stephen

:(
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Message 1855043 - Posted: 12 Mar 2017, 13:38:33 UTC - in response to Message 1855019.  
Last modified: 12 Mar 2017, 13:41:22 UTC

I can vouch for truth in advertising;

https://www.newegg.com/Product/Product.aspx?Item=N82E16814487296

It's clocked to the Moon. It's running around 1800MHz, way above the claimed Boost Clock.

To copy the nvidia-smi window, go to the top menu and select Select All, then Copy
It updates every few seconds so you have to catch it between updates. When you paste it, delete all but the bottom reading and frame it in pre /pre
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Message 1855047 - Posted: 12 Mar 2017, 14:23:38 UTC - in response to Message 1855043.  
Last modified: 12 Mar 2017, 14:24:12 UTC

Nothing wrong with the 1050/ti's as far as I can tell. Once we work out how to fully leverage the compute capacity without setting peoples' houses on fire, then they might well be the optimal bang for buck goto cards. It's just a shame that the status quo dictates going for the premium over the majority. In the long run though I feel that most crunchers are based in reality, which means these things are pretty awesome.
"Living by the wisdom of computer science doesn't sound so bad after all. And unlike most advice, it's backed up by proofs." -- Algorithms to live by: The computer science of human decisions.
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Message 1855055 - Posted: 12 Mar 2017, 15:08:51 UTC - in response to Message 1855043.  

. . OK here goes nothing ...


Mon Mar 13 02:02:08 2017       
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 375.39                 Driver Version: 375.39                    |
|-------------------------------+----------------------+----------------------+
| GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
| Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
|===============================+======================+======================|
|   0  GeForce GTX 105...  Off  | 0000:01:00.0      On |                  N/A |
| 65%   59C    P0    61W /  75W |   1597MiB /  4033MiB |     88%      Default |
+-------------------------------+----------------------+----------------------+
                                                                               
+-----------------------------------------------------------------------------+
| Processes:                                                       GPU Memory |
|  GPU       PID  Type  Process name                               Usage      |
|=============================================================================|
|    0      1049    G   /usr/lib/xorg/Xorg                             117MiB |
|    0      3110    G   compiz                                          57MiB |
|    0      4733    G   unity-control-center                             1MiB |
|    0      4760    C   ...ome_x41p_zi3k+_x86_64-pc-linux-gnu_cuda80  1417MiB |
+-----------------------------------------------------------------------------+



. . Damn I really love it when I can get something to work ... :)

Stephen

:)
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Message 1855061 - Posted: 12 Mar 2017, 15:23:12 UTC - in response to Message 1855055.  

Do you have a cc_config.xml file with the priority setting?
<cc_config>
<log_flags>
<sched_op_debug>1</sched_op_debug>
</log_flags>
<options>
<dont_contact_ref_site>1</dont_contact_ref_site>
<no_priority_change>1</no_priority_change>
<use_all_gpus>1</use_all_gpus>
<max_file_xfers_per_project>8</max_file_xfers_per_project>
<save_stats_days>365</save_stats_days>
<skip_cpu_benchmarks>1</skip_cpu_benchmarks>
</options>
</cc_config>
My cards are running mostly in the low 90s
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Message 1855088 - Posted: 12 Mar 2017, 17:07:13 UTC - in response to Message 1855055.  

. . OK here goes nothing ...


Mon Mar 13 02:02:08 2017       
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 375.39                 Driver Version: 375.39                    |
|-------------------------------+----------------------+----------------------+
| GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
| Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
|===============================+======================+======================|
|   0  GeForce GTX 105...  Off  | 0000:01:00.0      On |                  N/A |
| 65%   59C    P0    61W /  75W |   1597MiB /  4033MiB |     88%      Default |
+-------------------------------+----------------------+----------------------+
                                                                               
+-----------------------------------------------------------------------------+
| Processes:                                                       GPU Memory |
|  GPU       PID  Type  Process name                               Usage      |
|=============================================================================|
|    0      1049    G   /usr/lib/xorg/Xorg                             117MiB |
|    0      3110    G   compiz                                          57MiB |
|    0      4733    G   unity-control-center                             1MiB |
|    0      4760    C   ...ome_x41p_zi3k+_x86_64-pc-linux-gnu_cuda80  1417MiB |
+-----------------------------------------------------------------------------+



. . Damn I really love it when I can get something to work ... :)

Stephen

:)


now that you've got everything running, how satisfying is it to get things done under linux? :)
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Message 1855189 - Posted: 13 Mar 2017, 0:28:45 UTC - in response to Message 1855061.  

Do you have a cc_config.xml file with the priority setting?

My cards are running mostly in the low 90s


. . Does that mean if it is "1" I am OK or that I should change it? If I should change it, then to what value?

Stephen

??
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Message 1855199 - Posted: 13 Mar 2017, 1:28:21 UTC - in response to Message 1855088.  


now that you've got everything running, how satisfying is it to get things done under linux? :)


. . Hi Michel,

. . As I learn more I am feeling less "lost in the wilderness", but my heart still likes to look out windows. I am going to buy a nice little book and write down all the things I have learnt so I can find them again when I need them.

. . Still not entirely comfortable with Linux but CUDA80 is definitely two thumbs up ... There is a bit of a problem however. Now that I have seen what it can do on a GTX1050/1050ti I have a growing compulsion to see what it can do on my GTX1060-6GB's in my poor old Pentium-D. So now it is going to cost me more money. I have to buy 2 new drives, one to make Linux permanent on this machine <Core2 Duo + GTX1050ti> and another to install it on the Pentium-D. I guess you can say I am hooked :)

Stephen

8^0
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Message 1855204 - Posted: 13 Mar 2017, 2:44:34 UTC - in response to Message 1855061.  
Last modified: 13 Mar 2017, 2:53:37 UTC

Do you have a cc_config.xml file with the priority setting?
My cards are running mostly in the low 90s


. . this is my cc_config.xml

<cc_config>
  <log_flags>
    <task>1</task>
    <file_xfer>1</file_xfer>
    <sched_ops>1</sched_ops>
  </log_flags>
</cc_config>


. . I tried to add the options section as per your example but while I could see, open and change the file I could not save it. I need to review the permissions thingy.

Stephen

<shrug>
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Message 1855214 - Posted: 13 Mar 2017, 3:38:22 UTC - in response to Message 1855204.  

If you were using the Berkeley version of BOINC in your Home folder you wouldn't be having these permission problems ;-)
That's why I use it, it's soooo much less annoying.
If you haven't done it yet, change the setting so the .xml files open with gedit. Right click on the .xml, select Properties, Open With - gedit. Set it as Default.
To visually edit cc_config.xml as Root, Open a terminal and enter gksu nautilus. Navigate to the file and open it with gedit. Make the edit and hit save.
You need to add the <options></options> tag to your existing file.
There is only One option, Zero disables it, One Enables it. It should Increase your GPU Usage by letting the App run at Nice level Zero.

<cc_config>
  <log_flags>
     <task>1</task>
     <file_xfer>1</file_xfer>
     <sched_ops>1</sched_ops>
  </log_flags>
  <options>
    <no_priority_change>1</no_priority_change>
    <use_all_gpus>1</use_all_gpus>
  </options>
</cc_config>
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Message 1855227 - Posted: 13 Mar 2017, 4:45:27 UTC - in response to Message 1855214.  

If you were using the Berkeley version of BOINC in your Home folder you wouldn't be having these permission problems ;-)
That's why I use it, it's soooo much less annoying.

. . Having seen how well CUDA80 performs on the 1050ti I will be making the change to Linux permanent, so I will be forking out for the cheapest SATA HDD available (1TB seems to be the minimum these days), and re-installing Linux on that. But Linux will then have a LOT of room to play in, and I will absolutely NOT be installing the repository version of BOINC.

. . It will mean losing the current host ID and creating a new one unless there is some way to migrate it from the USB drive to the new installation on the HDD, which I have not yet given up on doing. My theory is that if I run the cache dry, then install Linux to the HDD, but before re-installing BOINC copy the current active BOINC files onto the HDD /home where BOINC will be installed, then run the non-repository BOINC installer pointing it to that folder, it will recognise the exising host details and re-activate it.

If you haven't done it yet, change the setting so the .xml files open with gedit. Right click on the .xml, select Properties, Open With - gedit. Set it as Default.
To visually edit cc_config.xml as Root, Open a terminal and enter gksu nautilus. Navigate to the file and open it with gedit. Make the edit and hit save.
You need to add the <options></options> tag to your existing file.
There is only One option, Zero disables it, One Enables it. It should Increase your GPU Usage by letting the App run at Nice level Zero.


. . I've been doing that manually each time, right-click select gedit and open. Making it default will be much nicer :)

. . I was going to just cut/paste your options section into my file. But I guess I don't need all the settings. If it works then I guess I will be pumping up my fan settings even further :(.

Stephen

:)
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Message 1855235 - Posted: 13 Mar 2017, 6:29:43 UTC - in response to Message 1855214.  


You need to add the <options></options> tag to your existing file.
There is only One option, Zero disables it, One Enables it. It should Increase your GPU Usage by letting the App run at Nice level Zero.


. . So should I be disabling it or enabling it? I have added the option using a value of 1 but there seems to be no difference. I selected 'read config files' to make sure it has read the file. Is there anything else I need to do?

Stephen

?
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Message 1855295 - Posted: 13 Mar 2017, 15:06:55 UTC - in response to Message 1855235.  

Are you sure it's working? If it's working you would see a message in the Event Log when you run the Read config files;
Mon Mar 13 11:01:18 2017 | | Config: run apps at regular priority

Since running at Regular Priority would mean running at Nice level Zero, open Top and see what the App has for a Nice (NI) value.
It's possible the Nice level doesn't matter that much with the Special App, it might even vary by machine and number of GPUs.
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Message 1855356 - Posted: 13 Mar 2017, 20:29:28 UTC - in response to Message 1855295.  

Are you sure it's working? If it's working you would see a message in the Event Log when you run the Read config files;
Mon Mar 13 11:01:18 2017 | | Config: run apps at regular priority

Since running at Regular Priority would mean running at Nice level Zero, open Top and see what the App has for a Nice (NI) value.
It's possible the Nice level doesn't matter that much with the Special App, it might even vary by machine and number of GPUs.


. . Hi TBar

. . I checked and it is reading the file OK. I cannot capture the text but that line is in the Event log.

. . When I run Top it shows the CUDA app with NI level 10. So for some reason it seems to make no difference.

Stephen

?
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Message 1855421 - Posted: 14 Mar 2017, 1:12:30 UTC

. . 14th March,


	H A P P Y

		B I R T H D A Y

			A L B E R T!



Stephen

:)
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Message 1855476 - Posted: 14 Mar 2017, 4:12:37 UTC - in response to Message 1855356.  

Are you sure it's working? If it's working you would see a message in the Event Log when you run the Read config files;
Mon Mar 13 11:01:18 2017 | | Config: run apps at regular priority

Since running at Regular Priority would mean running at Nice level Zero, open Top and see what the App has for a Nice (NI) value.
It's possible the Nice level doesn't matter that much with the Special App, it might even vary by machine and number of GPUs.
. . Hi TBar

. . I checked and it is reading the file OK. I cannot capture the text but that line is in the Event log.
. . When I run Top it shows the CUDA app with NI level 10. So for some reason it seems to make no difference.

Stephen

Well, on My Ubuntu machines it shows the Nice value of Zero.
No idea why it doesn't work on yours. Copying & pasting from the Event Log is simple, click on the line and hit Copy Selected.
Top is the same as nvidia-smi, you have to catch it between updates.
top - 00:06:50 up 3 days, 15:08,  2 users,  load average: 2.28, 1.87, 1.84
Tasks: 229 total,   3 running, 226 sleeping,   0 stopped,   0 zombie
%Cpu(s): 37.6 us,  9.2 sy,  0.0 ni, 53.2 id,  0.0 wa,  0.0 hi,  0.0 si,  0.0 st

 PID  USER      PR   NI  VIRT    RES    SHR  S  %CPU %MEM     TIME + COMMAND                     
 7493 tbar      20   0   53552  49756   3780 R  98.7  1.2  88:04.32 MBv8_8.0r3305_s             
18692 tbar      20   0 37.992g 543372 328100 R  17.3 13.4   0:35.06 setiathome_x41p             
19012 tbar      20   0 36.722g 512008 304460 S  12.6 12.7   0:07.50 setiathome_x41p             
18447 tbar      20   0 36.727g 517468 304448 S  11.6 12.8   0:41.50 setiathome_x41p
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Message 1855477 - Posted: 14 Mar 2017, 4:26:22 UTC - in response to Message 1855476.  

I think that is the difference of installing BOINC in the home folder or system folder. The Software Center automatically puts it in the system folder and makes priority changes difficult because of the user account' boinc'. This is my output with priority flag set or unset, it doesn't change.

 7436 boinc     30  10   21088  20304   3052 R  99.9  0.1  46:30.46 ap_7.05r27+ 
20735 boinc     30  10   53076  49260   3772 R  99.9  0.3  37:45.08 MBv8_8.0r3+ 
 2297 brent     20   0  491992  43244  20740 S  33.3  0.3   8:25.20 vino-server 
27447 boinc     30  10 46.738g 539132 328356 S  19.3  3.3   0:30.01 setiathome+ 
27280 boinc     30  10 44.723g 530600 320880 S  16.6  3.2   0:34.54 setiathome+ 
 3027 brent     20   0  540008  47760  37876 R  16.0  0.3 108:37.17 gnome-syst+ 
 1196 root      20   0  300060 108940  65344 S  13.0  0.7  42:04.67 Xorg 
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Message 1855486 - Posted: 14 Mar 2017, 4:47:16 UTC - in response to Message 1855477.  

Yet another reason to use the Berkeley version in your Home folder...
My Priority 20 Nice 0 verses 30 & 10
setiathome_x41p_zi3k+_x86_64-pc-linux-gnu_cuda80
Location: /home/tbar/BOINC/projects/setiathome.berkeley.edu
Owner: Me
Group: tbar
;-)
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Message 1855491 - Posted: 14 Mar 2017, 5:35:31 UTC - in response to Message 1855476.  
Last modified: 14 Mar 2017, 5:50:21 UTC


Well, on My Ubuntu machines it shows the Nice value of Zero.
No idea why it doesn't work on yours. Copying & pasting from the Event Log is simple, click on the line and hit Copy Selected.
Top is the same as nvidia-smi, you have to catch it between updates.
top - 00:06:50 up 3 days, 15:08,  2 users,  load average: 2.28, 1.87, 1.84
Tasks: 229 total,   3 running, 226 sleeping,   0 stopped,   0 zombie
%Cpu(s): 37.6 us,  9.2 sy,  0.0 ni, 53.2 id,  0.0 wa,  0.0 hi,  0.0 si,  0.0 st

 PID  USER      PR   NI  VIRT    RES    SHR  S  %CPU %MEM     TIME + COMMAND                     
 7493 tbar      20   0   53552  49756   3780 R  98.7  1.2  88:04.32 MBv8_8.0r3305_s             
18692 tbar      20   0 37.992g 543372 328100 R  17.3 13.4   0:35.06 setiathome_x41p             
19012 tbar      20   0 36.722g 512008 304460 S  12.6 12.7   0:07.50 setiathome_x41p             
18447 tbar      20   0 36.727g 517468 304448 S  11.6 12.8   0:41.50 setiathome_x41p


. . OK, always up for a try.

Tue 14 Mar 2017 16:17:47 AEDT |  | Config: run apps at regular priority


+-----------------------------------------------------------------------------+
| NVIDIA-SMI 375.39                 Driver Version: 375.39                    |
|-------------------------------+----------------------+----------------------+
| GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
| Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
|===============================+======================+======================|
|   0  GeForce GTX 105...  Off  | 0000:01:00.0      On |                  N/A |
| 80%   57C    P0    52W /  75W |   1708MiB /  4033MiB |     78%      Default |
+-------------------------------+----------------------+----------------------+
                                                                               
+-----------------------------------------------------------------------------+
| Processes:                                                       GPU Memory |
|  GPU       PID  Type  Process name                               Usage      |
|=============================================================================|
|    0      1049    G   /usr/lib/xorg/Xorg                             144MiB |
|    0      3110    G   compiz                                         143MiB |
|    0     18293    C   ...ome_x41p_zi3k+_x86_64-pc-linux-gnu_cuda80  1417MiB |
+---------------------------------------------------------------------------


. . This one was like trying to catch a fish with your bare hands.

 PID USER      PR  NI    VIRT    RES    SHR S  %CPU %MEM     TIME+ COMMAND                        
17975 boinc     30  10   49520  41180   3780 R  96.7  0.7  33:22.18 MBv8_8.0r3305_s                
18293 boinc     30  10 14.341g 623916 329632 S  18.6 10.3   1:03.51 setiathome_x41p                
 1075 root     -51   0       0      0      0 S   7.0  0.0 174:42.09 irq/35-nvidia                  
 1049 root      20   0  208312  81400  58624 S   5.3  1.3  75:55.20 Xorg                           
 3256 stephen   20   0  613608  47324  28508 S   5.0  0.8 123:17.58 boincmgr                       
 3110 stephen   20   0 1411004 212912  71432 S   3.3  3.5  27:50.86 compiz                         
 2918 stephen   20   0  563736  49620  21504 S   1.3  0.8   1:04.33 unity-panel-ser                


. . I wonder if it could be because mine is the repository version, and where it is located on the drive. Is it possible something is overriding that command in the cc_config.xml?

. . BTW I have in my hot little hand a nice new 1TG HDD, it will replace the shaggy old 250GB in the Pentium machine and will house the new install of Linux. The two GTX1060-6GB cards are getting CUDA80! I figure the outrage is a perfect time when it runs out of work to suspend BOINC, take it down, disconnect the HDD and SSD and connect this in their place (I'll probably toss in the extra 4GB ram as well). A quick boot from the Ubuntu Install DVD and quick as a flash - Linux. I haven't taken notes yet but I will be referring back to the messages and it will hopefully have a reasonably painless rebirth as "La-Bamba" the Linux Guppi muncher. With the lower demand CUDA80 makes on the CPU and without the extended SoG load time it should turn out some impressive numbers (I hope).

. . I have the fever .....

. . Then tomorrow night ......... We'll take over the world Pinky ... ooh oops wrong thing.

Stephen

:)


Stephen
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